Hybrid-lambdaHybrid-Lambda is a software package that can simulate gene trees within a rooted species network or a rooted species tree under the Kingman's coalescent or Lambda coalescent process.
NEWS
- 15 Nov 2015: Version 0.6.1-beta Released
- 13 Apr 2015: Version 0.6-beta Released
- 23 Nov 2014: Version 0.5-beta Released
- 05 Sep 2014: Version 0.4-beta Released
- 08 Apr 2014: Version 0.3-beta Released
PUBLICATION
Sha Zhu, James H Degnan, Sharyn J Goldstien, Bjarki Eldon. Hybrid-Lambda: simulation of multiple merger and Kingman gene genealogies in species networks and species trees. BMC Bioinformatics, 16(292), 2015. doi:10.1186/s12859-015-0721-y.
DOCUMENTATION
INSTALLATION
To install hybrid-Lambda from source code, simply
cd src/
make
EXECUTABLE DOWNLOAD
| Platform - Compiler | File |
|---|---|
| Linux (x86_64) - gcc4.9 | hybrid-Lambda-g++-4.9.zip |
| Linux (x86_64) - gcc4.8 | hybrid-Lambda-g++-4.8.zip |
| Linux (x86_64) - gcc4.7 | hybrid-Lambda-g++-4.7.zip |
| Mac OSX Intel | hybrid-Lambda-OSX10.9.zip |